PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oropetium_20150105_11009A
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
Family NAC
Protein Properties Length: 373aa    MW: 40279.9 Da    PI: 7.1527
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oropetium_20150105_11009AgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM30.41.1e-093112831126
                        NAM  31 eevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkya....tgkrknratksgyWkatgkdkevlskkgelvglkktLvf 108
                                ++ +++ ++y +eP  L           + +fF+++ k+++    ++ r++ra+  g W +   +++v++ +g ++g +  L +
  Oropetium_20150105_11009A  31 HQSFASWEVYACEPGVLXxXxXXXXXXGDRFFFTTTCKRQPqeagKSVRAHRAAGPGSWYSHSATTDVTDGDGVKIGERSKLPY 114
                                24488899*********8332333344478999998888873333455999999****************************** PP

                        NAM 109 ykgrapkgektdWvmhey 126
                                     + g +tdW+m+e 
  Oropetium_20150105_11009A 115 K----KGGLSTDWLMDEV 128
                                8....568899****995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100511.351151IPR003441NAC domain
SuperFamilySSF1019414.05E-1033150IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
MPVNQRETIW NWNPAAKPKD RITTENVRHN HQSFASWEVY ACEPGVLXXX XXXXXXXGDR  60
FFFTTTCKRQ PQEAGKSVRA HRAAGPGSWY SHSATTDVTD GDGVKIGERS KLPYKKGGLS  120
TDWLMDEVSS CHPGTVVGGD RQYVFCKMYV SLRAAADSAA RQESDAXXXX XXXXXXXPPP  180
VEPAVATPNK RSAQAPPIVA PPRKRIRGAA ANTTADPYKT SVVVVPTPPE DPAVTAPNKR  240
SAPPMMIAKT QCGKRVRGAP VAPTLPPPPA GFATPLPSPR PGTPGSDTIP TTLQPGRSPA  300
PAAPRPSCQQ QPPAPLDLLS NEDPAQTEDD DLNQFASLLE DSLEVIEEEH QVPVQAEDEH  360
RAPSTKNQEP SR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18322799